Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 38 curated entries in PaperBLAST's database that match '2.3.1.46' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS15260 ABB28_15300 WP_057687234.1: homoserine O-acetyltransferase
is similar to:
PaperBLAST

SST_STEMA / A0A0I9RJ56: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Stenotrophomonas maltophilia

88% id,
100% cov

SST_XANCP / Q8P8L2: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Xanthomonas campestris

82% id,
100% cov

SST_FRAAD / H8L374: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Frateuria aurantia

68% id,
98% cov

More...

ABB28_RS11195 ABB28_11235 WP_057508708.1: homoserine O-succinyltransferase
is similar to:
PaperBLAST

METXS_XANCP / Q8P6V8: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Xanthomonas campestris

76% id,
89% cov

METXS_BREDA / F4QV02: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Brevundimonas diminuta

40% id,
89% cov

SST_XANCP / Q8P8L2: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Xanthomonas campestris

30% id,
99% cov

More...

ABB28_RS06285 ABB28_06320 WP_338063026.1: alpha/beta hydrolase
is similar to:
PaperBLAST

METXS_PSEPK / Q88CT3: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Pseudomonas putida

30% id,
32% cov

METXS_BORPD / A9I0E6: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Bordetella petrii

30% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3704-4855 (frame +2) on NZ_LDJK01000049.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_49, whole genome shotgun sequence
is similar to:
PaperBLAST

METXS_XANCP / Q8P6V8: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Xanthomonas campestris
Also see hits to annotated proteins above

71% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory