Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 16 curated entries in PaperBLAST's database that match '2.5.1.49' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS09425 ABB28_09455 WP_057508383.1: cystathionine gamma-synthase
is similar to:		 PaperBLAST

Ga0059261_3194: O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) from Sphingomonas koreensis

 38% id,
95% cov

L7N4M1: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Mycobacterium tuberculosis

 37% id,
94% cov

oah / Q2RWB7: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Rhodospirillum rubrum

 36% id,
96% cov

More...

ABB28_RS11200 ABB28_11240 WP_057508709.1: O-succinylhomoserine (thiol)-lyase
is similar to:		 PaperBLAST

Ga0059261_3194: O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) from Sphingomonas koreensis

 34% id,
98% cov

CYSD_EMENI / P50125: Homocysteine synthase; O-acetylhomoserine sulfhydrylase; OAH SHL; OAH sulfhydrylase; EC 2.5.1.49 from Emericella nidulans
cysD / GI|2605905: O-acetylhomoserine (thiol)-lyase; EC 2.5.1.49 from Emericella nidulans

 31% id,
99% cov

oah / Q2RWB7: O-acetylhomoserine aminocarboxypropyltransferase (EC 2.5.1.49) from Rhodospirillum rubrum

 31% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory