Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.66' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS12185 ABB28_12220 WP_057508908.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

37% id,
97% cov

ABB28_RS11865 ABB28_11900 WP_057508832.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

28% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory