Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS06360 ABB28_06395 WP_057507836.1: ribokinase is similar to:	PaperBLAST
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	38% id, 99% cov
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis	39% id, 95% cov
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli	39% id, 95% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	38% id, 96% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	37% id, 97% cov
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	37% id, 97% cov
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila	39% id, 92% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus	37% id, 97% cov
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	37% id, 94% cov
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti	36% id, 97% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	35% id, 96% cov
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	37% id, 90% cov
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens	36% id, 92% cov
RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe	34% id, 97% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	35% id, 91% cov
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	34% id, 93% cov
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major	31% id, 95% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	33% id, 78% cov
P71913: ribokinase (EC 2.7.1.15) from Mycobacterium tuberculosis	42% id, 61% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	34% id, 54% cov
More...

ABB28_RS12320 ABB28_12355 WP_057508915.1: carbohydrate kinase is similar to:	PaperBLAST
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	30% id, 99% cov
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	29% id, 97% cov
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli	29% id, 97% cov
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	29% id, 97% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	29% id, 97% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	29% id, 95% cov
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis	28% id, 98% cov
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	28% id, 94% cov
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	27% id, 98% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus	25% id, 95% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	24% id, 92% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	25% id, 57% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	38% id, 19% cov
More...

pdxY ABB28_RS15065 ABB28_15105 WP_057687197.1: pyridoxal kinase is similar to:	PaperBLAST
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	27% id, 72% cov
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila	37% id, 32% cov

rpiA ABB28_RS13735 ABB28_13775 WP_057509158.1: ribose-5-phosphate isomerase RpiA is similar to:	PaperBLAST
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	36% id, 40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory