Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS12320 ABB28_12355 WP_057508915.1: carbohydrate kinase
is similar to:
PaperBLAST

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

58% id,
99% cov

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

42% id,
96% cov

Q42896: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

42% id,
96% cov

More...

ABB28_RS13605 ABB28_13645 WP_057509133.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

33% id,
100% cov

ABB28_RS06360 ABB28_06395 WP_057507836.1: ribokinase
is similar to:
PaperBLAST

Q42896: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

26% id,
94% cov

SCRK2_MAIZE / Q6XZ78: Fructokinase-2; ZmFRK2; EC 2.7.1.4 from Zea mays

27% id,
92% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

25% id,
97% cov

More...

ABB28_RS12915 ABB28_12955 WP_057509003.1: sugar kinase
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

27% id,
87% cov

Q42645: fructokinase (EC 2.7.1.4) from Beta vulgaris

23% id,
95% cov

Q9SID0: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

27% id,
62% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

42694-43788 (frame +1) on NZ_LDJK01000060.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_60, whole genome shotgun sequence
is similar to:
PaperBLAST

Q42645: fructokinase (EC 2.7.1.4) from Beta vulgaris
Also see hits to annotated proteins above

24% id,
98% cov

Q9SID0: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana
Also see hits to annotated proteins above

27% id,
65% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory