Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 38 curated entries in PaperBLAST's database that match '2.7.6.1' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS08010 ABB28_08040 WP_042614861.1: ribose-phosphate diphosphokinase is similar to:	PaperBLAST
KPRS_ECOLI / P0A717: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Escherichia coli DnaR / b1207: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli prs / P0A717: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli P0A719: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli	60% id, 99% cov
KPRS_SALTY / P0A1V6: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Salmonella typhimurium	60% id, 99% cov
E7EAU9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Bacillus amyloliquefaciens	54% id, 97% cov
KPRS_BACSU / P14193: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PPRibP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Bacillus subtilis	54% id, 97% cov
Q4KME9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Danio rerio	47% id, 98% cov
PRPS2 / P11908: Ribose-phosphate pyrophosphokinase 2 (EC 2.7.6.1) from Homo sapiens	47% id, 98% cov
PRPS1_HUMAN / P60891: Ribose-phosphate pyrophosphokinase 1; PPRibP; Phosphoribosyl pyrophosphate synthase I; PRS-I; EC 2.7.6.1 from Homo sapiens PRPS1_MOUSE / Q9D7G0: Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase I; PRS-I; EC 2.7.6.1 from Mus musculus PRPS1 / P60891: Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) from Homo sapiens P60891: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Homo sapiens	47% id, 98% cov
Q5SHU3: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermus thermophilus	46% id, 100% cov
Q08CA5: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Danio rerio	46% id, 98% cov
PRPS1L1 / P21108: Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1) from Homo sapiens	46% id, 98% cov
KPR2_SCHPO / O94413: Ribose-phosphate pyrophosphokinase 2; Phosphoribosyl pyrophosphate synthase 2; EC 2.7.6.1 from Schizosaccharomyces pombe	45% id, 98% cov
H9D1K2: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Culex pipiens	45% id, 98% cov
KPR3_YEAST / P38689: Ribose-phosphate pyrophosphokinase 3; Phosphoribosyl pyrophosphate synthase 3; EC 2.7.6.1 from Saccharomyces cerevisiae	44% id, 97% cov
PRS1: ribose-phosphate pyrophosphokinase; EC 2.7.6.1 from Candida albicans	44% id, 97% cov
KPR2_YEAST / P38620: Ribose-phosphate pyrophosphokinase 2; Phosphoribosyl pyrophosphate synthase 2; EC 2.7.6.1 from Saccharomyces cerevisiae	44% id, 97% cov
KPRS_MYCTU / P9WKE3: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Mycobacterium tuberculosis	44% id, 96% cov
KPR4_YEAST / P38063: Ribose-phosphate pyrophosphokinase 4; Phosphoribosyl pyrophosphate synthase 4; EC 2.7.6.1 from Saccharomyces cerevisiae	44% id, 95% cov
A0R3C8: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Mycolicibacterium smegmatis	42% id, 96% cov
KPRS2_STRP6 / Q5XC85: Putative ribose-phosphate pyrophosphokinase 2; RPPK 2; 5-phospho-D-ribosyl alpha-1-diphosphate synthase 2; Phosphoribosyl diphosphate synthase 2; Phosphoribosyl pyrophosphate synthase 2; P-Rib-PP synthase 2; PRPP synthase 2; PRPPase 2; EC 2.7.6.1 from Streptococcus pyogenes	43% id, 94% cov
KPRS_MYCGE / P47304: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Mycoplasma genitalium	42% id, 95% cov
Q9VT33: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Drosophila melanogaster	45% id, 86% cov
KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis	32% id, 93% cov
KPRS_THEVO / Q97CA5: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermoplasma volcanium Q97CA5: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermoplasma volcanium	27% id, 100% cov
KPR1_SCHPO / P41831: Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase 1; EC 2.7.6.1 from Schizosaccharomyces pombe	41% id, 48% cov
KPR1_YEAST / P32895: Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase 1; EC 2.7.6.1 from Saccharomyces cerevisiae	40% id, 46% cov
KPR5_YEAST / Q12265: Ribose-phosphate pyrophosphokinase 5; Phosphoribosyl pyrophosphate synthase 5; EC 2.7.6.1 from Saccharomyces cerevisiae	41% id, 23% cov
KPR5_YEAST / Q12265: Ribose-phosphate pyrophosphokinase 5; Phosphoribosyl pyrophosphate synthase 5; EC 2.7.6.1 from Saccharomyces cerevisiae	41% id, 21% cov
KPR5_YEAST / Q12265: Ribose-phosphate pyrophosphokinase 5; Phosphoribosyl pyrophosphate synthase 5; EC 2.7.6.1 from Saccharomyces cerevisiae	47% id, 17% cov
Q5AYB9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Aspergillus nidulans	39% id, 19% cov
Q5AYB9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Aspergillus nidulans	40% id, 18% cov
More...

ABB28_RS16165 ABB28_16210 WP_057687399.1: adenine phosphoribosyltransferase is similar to:	PaperBLAST
KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis	28% id, 49% cov
A3MV85: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Pyrobaculum calidifontis	34% id, 40% cov

upp ABB28_RS00140 ABB28_00145 WP_057506676.1: uracil phosphoribosyltransferase is similar to:	PaperBLAST
KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis	24% id, 58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2934-3623 (frame +3) on NZ_LDJK01000089.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_89, whole genome shotgun sequence is similar to:	PaperBLAST
A3MV85: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Pyrobaculum calidifontis Also see hits to annotated proteins above	30% id, 66% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory