Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.108' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS12330 ABB28_12365 WP_057508917.1: glycoside hydrolase family 2 protein
is similar to:
PaperBLAST

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

21% id,
57% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory