Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 529 curated entries in PaperBLAST's database that match '3.2.1.21' as complete word(s).

These curated entries have 444 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS05205 ABB28_05240 WP_057507620.1: glycoside hydrolase family 3 protein
is similar to:
PaperBLAST

AAG43575.1: cellobiase (CelA) (EC 3.2.1.21)

58% id,
98% cov

Ga0059261_1166: Beta-glucosidase (EC 3.2.1.21) from Sphingomonas koreensis

54% id,
98% cov

ACE83024.1: β-glucosidase (CJA_1497) (Cel3B) (EC 3.2.1.21)

51% id,
99% cov

More...

ABB28_RS10755 ABB28_10790 WP_083492001.1: glycoside hydrolase family 3 C-terminal domain-containing protein
is similar to:
PaperBLAST

CCNA_01019: Beta-glucosidase (EC 3.2.1.21) from Caulobacter crescentus

51% id,
97% cov

BAA03152.1: β-glucosidase (CgB) (EC 3.2.1.21)

51% id,
93% cov

AAF21798.1: β-glucosidase (SalA) (EC 3.2.1.21)

48% id,
98% cov

More...

ABB28_RS08430 ABB28_08460 WP_057508205.1: glycoside hydrolase family 3 N-terminal domain-containing protein
is similar to:
PaperBLAST

AEW47970.1: β-glucosidase (H1_GH3) (EC 3.2.1.21)

46% id,
96% cov

AFH08277.1: β-glucosidase (BGL5;Bgl7O16) (EC 3.2.1.21)

42% id,
96% cov

AAL21070.1: β-glucosidase (BglX;STM2166) (EC 3.2.1.21)

41% id,
95% cov

More...

nagZ ABB28_RS03435 ABB28_03460 WP_057507288.1: beta-N-acetylhexosaminidase
is similar to:
PaperBLAST

NAG3_CELFI / Q7WUL3: Beta-N-acetylglucosaminidase/beta-glucosidase; 3-beta-N-acetyl-D-glucosaminidase/beta-D-glucosidase; Nag3; EC 3.2.1.21; EC 3.2.1.52 from Cellulomonas fimi
AAQ05801.1: bifunctional N-acetyl-β-glucosaminidase/β-glucosidase (Nag3) (acts as a phosphorylase in presence of phosphate) (Nag3A) (EC 3.2.1.21|3.2.1.52|2.4.1.-)

30% id,
58% cov

AEF56853.1: β-glucosidase A3 (EC 3.2.1.21)

32% id,
43% cov

AEX88467.1: ginsenoside β-glucosidase (Bgp3) (EC 3.2.1.21)

28% id,
35% cov

More...

ABB28_RS12330 ABB28_12365 WP_057508917.1: glycoside hydrolase family 2 protein
is similar to:
PaperBLAST

CDO50493.1: β-glucosidase (Gh2;TaGH2) (EC 3.2.1.21)

28% id,
36% cov

CDO50494.1: β-glucosidase (Gh2;TbGH2) (EC 3.2.1.21)

28% id,
29% cov

ABB28_RS00585 ABB28_00590 WP_057506759.1: SGNH/GDSL hydrolase family protein
is similar to:
PaperBLAST

ABD81757.1: β-glucosidase / cellodextrinase 3A (CedA;Sde_2497) (Ced3A) (EC 3.2.1.21|3.2.1.74)

25% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

36570-37100 (frame -2) on NZ_LDJK01000046.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_46, whole genome shotgun sequence
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

31% id,
28% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory