Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 134 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

treA ABB28_RS04560 ABB28_04595 WP_057507494.1: alpha,alpha-trehalase TreA
is similar to:
PaperBLAST

Q3BXX2: alpha,alpha-trehalase (EC 3.2.1.28) from Xanthomonas campestris

55% id,
99% cov

AO356_24205: Alpha,alpha-trehalase (EC 3.2.1.28) from Pseudomonas fluorescens

57% id,
95% cov

TREA_ECOLI / P13482: Periplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Tre37A; EC 3.2.1.28 from Escherichia coli
Tre / b1197: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli
AAC74281.1: α,α-trehalase (periplasmic) (TreA;OsmA) (Tre37A) (EC 3.2.1.28)
treA / P13482: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli

57% id,
94% cov

More...

ABB28_RS02135 ABB28_02145 WP_057507037.1: alpha-glucosidase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

54% id,
95% cov

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

45% id,
94% cov

ABB28_RS01290 ABB28_01295 WP_057506894.1: glycoside hydrolase family 15 protein
is similar to:
PaperBLAST

TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum

32% id,
98% cov

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)

33% id,
92% cov

TREH_MYCTU / P71741: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis

33% id,
89% cov

More...

ABB28_RS03155 ABB28_03180 WP_083491891.1: glycoside hydrolase family 15 protein
is similar to:
PaperBLAST

TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum

29% id,
98% cov

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)

33% id,
67% cov

TREH_MYCTU / P71741: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis

33% id,
66% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory