Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS15380 ABB28_15420 WP_057687252.1: acetylornithine deacetylase
is similar to:
PaperBLAST

argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris

87% id,
99% cov

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

31% id,
96% cov

ABB28_RS17185 ABB28_17230 WP_057687580.1: M14 family metallocarboxypeptidase
is similar to:
PaperBLAST

SO3749: Acetylornithine deacetylase (EC:3.5.1.16) from Shewanella oneidensis

29% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory