Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

rocF ABB28_RS04805 ABB28_04840 WP_057507546.1: arginase
is similar to:
PaperBLAST

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

71% id,
100% cov

Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.

70% id,
82% cov

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum

47% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory