Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 18 curated entries in PaperBLAST's database that match '3.5.3.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS00175 ABB28_00180 WP_057506685.1: agmatine deiminase family protein
is similar to:
PaperBLAST

Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

39% id,
99% cov

aguA / O24890: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

39% id,
99% cov

C8J_0892 / A0A5Y8XU16: agmatine deaminase (EC 3.5.3.12) from Campylobacter jejuni

35% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory