Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 2 curated entries in PaperBLAST's database that match '4.1.1.75' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ilvG ABB28_RS14475 ABB28_14515 WP_057509298.1: acetolactate synthase 2 catalytic subunit
is similar to:
PaperBLAST

ARUI_PSEAE / Q9HUI8: Probable 2-ketoarginine decarboxylase AruI; 2-oxo-5-guanidinopentanoate decarboxylase; 5-guanidino-2-oxopentanoate decarboxylase; EC 4.1.1.75 from Pseudomonas aeruginosa
aruI / Q9HUI8: 2-ketoarginine decarboxylase (EC 4.1.1.75) from Pseudomonas aeruginosa

31% id,
95% cov

ABB28_RS02940 ABB28_02955 WP_057507191.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ARUI_PSEAE / Q9HUI8: Probable 2-ketoarginine decarboxylase AruI; 2-oxo-5-guanidinopentanoate decarboxylase; 5-guanidino-2-oxopentanoate decarboxylase; EC 4.1.1.75 from Pseudomonas aeruginosa
aruI / Q9HUI8: 2-ketoarginine decarboxylase (EC 4.1.1.75) from Pseudomonas aeruginosa

31% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory