Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 68 curated entries in PaperBLAST's database that match '4.2.1.10' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

aroQ ABB28_RS04150 ABB28_04185 WP_057507424.1: type II 3-dehydroquinate dehydratase is similar to:	PaperBLAST
Q9PH97: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Xylella fastidiosa	71% id, 99% cov
O30557: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas aeruginosa	70% id, 99% cov
A8AQF2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Citrobacter koseri	63% id, 95% cov
Q0VMZ2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Alcanivorax borkumensis	64% id, 91% cov
A0A0H3FM50: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Klebsiella aerogenes	61% id, 96% cov
A1SZA3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychromonas ingrahamii	59% id, 96% cov
A3M692: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acinetobacter baumannii	58% id, 95% cov
AROQ_ACTPL / P43877: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Actinobacillus pleuropneumoniae	57% id, 94% cov
N1V364: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arthrobacter crystallopoietes	58% id, 91% cov
A5WDH9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Psychrobacter sp.	59% id, 87% cov
3DHQ_CANAL / Q59Z17: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; EC 4.2.1.10 from Candida albicans	51% id, 99% cov
G8M0G7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acetivibrio clariflavus	51% id, 98% cov
O52377: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum	52% id, 94% cov
qsuC / A4QB64: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum	52% id, 94% cov
3DHQ_EMENI / P05147: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; EC 4.2.1.10 from Emericella nidulans	55% id, 88% cov
Q88IJ6: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas putida	49% id, 99% cov
I0L192: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Micromonospora lupini	49% id, 94% cov
AROQ_STRCO / P15474: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Streptomyces coelicolor P15474: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces coelicolor	48% id, 94% cov
A0A124C1Y7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Streptomyces acidiscabies	48% id, 90% cov
M1E6S9: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Thermodesulfobium narugense	43% id, 99% cov
E4RLB7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Halanaerobium hydrogeniformans	45% id, 93% cov
GOX0437 / Q5FTS6: periplasmic dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans	48% id, 89% cov
D1A7X0: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Thermomonospora curvata	43% id, 97% cov
W6JLW3: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Gluconobacter oxydans	47% id, 89% cov
D4LCT8: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Ruminococcus champanellensis	43% id, 97% cov
D4S0D1: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Butyrivibrio crossotus	42% id, 96% cov
AROQ_MYCTU / P9WPX7: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Mycobacterium tuberculosis P9WPX7: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Mycobacterium tuberculosis	46% id, 89% cov
B2A551: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Natranaerobius thermophilus	40% id, 97% cov
AROQ_BACSU / P54517: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Bacillus subtilis P54517: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Bacillus subtilis	40% id, 96% cov
AROQ_HELPY / Q48255: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type II DHQase; EC 4.2.1.10 from Helicobacter pylori Q48255: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Helicobacter pylori	42% id, 87% cov
3DHQ_NEUCR / P05195: Catabolic 3-dehydroquinase; cDHQase; 3-dehydroquinate dehydratase; Quinic acid degradation cluster protein 2f; EC 4.2.1.10 from Neurospora crassa	39% id, 92% cov
B9CK59: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Lancefieldella rimae	41% id, 49% cov
More...

aroD ABB28_RS09905 ABB28_09935 WP_245625322.1: type I 3-dehydroquinate dehydratase is similar to:	PaperBLAST
3DHQ_ACIAD / Q59087: Catabolic 3-dehydroquinate dehydratase; 3-dehydroquinase; EC 4.2.1.10 from Acinetobacter baylyi quiB / Q59087: catabolic 3-dehydroquinate dehydratase (EC 4.2.1.10) from Acinetobacter baylyi	46% id, 99% cov
AROD_SALTI / P24670: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Salmonella typhi P24670: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Salmonella enterica	44% id, 99% cov
AROD_ENTFA / P36923: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Enterococcus faecalis P36923: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Enterococcus faecalis	43% id, 100% cov
AROD_ECOLI / P05194: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Escherichia coli AroD / b1693: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Escherichia coli aroD / RF\|NP_416208.1: 3-dehydroquinate dehydratase; EC 4.2.1.10 from Escherichia coli aroD / P05194: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Escherichia coli P05194: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Escherichia coli	42% id, 100% cov
AROD_CLOD6 / Q186A6: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Clostridioides difficile	42% id, 98% cov
AROD_SALTY / P58687: 3-dehydroquinate dehydratase; 3-dehydroquinase; DHQD; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Salmonella typhimurium P58687: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Salmonella enterica	41% id, 100% cov
AROD_GEOKA / Q5KY94: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Geobacillus kaustophilus	30% id, 99% cov
AROD_STAAR / Q6GII7: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Staphylococcus aureus	30% id, 95% cov
AROD_AQUAE / O66440: 3-dehydroquinate dehydratase; 3-dehydroquinase; Type I DHQase; Type I dehydroquinase; DHQ1; EC 4.2.1.10 from Aquifex aeolicus	29% id, 94% cov
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	32% id, 44% cov
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	31% id, 44% cov
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	32% id, 40% cov
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	26% id, 38% cov
More...

aroE ABB28_RS10360 ABB28_10395 WP_057508550.1: shikimate dehydrogenase is similar to:	PaperBLAST
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	31% id, 43% cov
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	28% id, 49% cov

aroB ABB28_RS11280 ABB28_11320 WP_057508721.1: 3-dehydroquinate synthase is similar to:	PaperBLAST
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	37% id, 22% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	38% id, 12% cov

hemA ABB28_RS07985 ABB28_08015 WP_057508127.1: glutamyl-tRNA reductase is similar to:	PaperBLAST
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	27% id, 29% cov
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	31% id, 23% cov
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	29% id, 19% cov
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	32% id, 15% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory