Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 62 curated entries in PaperBLAST's database that match '4.2.1.17' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS04910 ABB28_04945 WP_057507562.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q9I5I4: enoyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas aeruginosa

64% id,
94% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

39% id,
99% cov

PAAF_ECOLI / P76082: 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC 4.2.1.17 from Escherichia coli
YdbR / b1393: putative 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli
P76082: enoyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli

38% id,
98% cov

More...

ABB28_RS00235 ABB28_00240 WP_057506695.1: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q0KEG0: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

58% id,
100% cov

ECHM_MOUSE / Q8BH95: Enoyl-CoA hydratase, mitochondrial; mECH; mECH1; Enoyl-CoA hydratase 1; ECHS1; Short-chain enoyl-CoA hydratase; SCEH; EC 4.2.1.17; EC 5.3.3.8 from Mus musculus

24% id,
84% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

25% id,
81% cov

More...

ABB28_RS05820 ABB28_05855 WP_057507779.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

43% id,
100% cov

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

45% id,
95% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

42% id,
98% cov

More...

ABB28_RS13605 ABB28_13645 WP_057509133.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

37% id,
98% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

36% id,
96% cov

PAAF_ECOLI / P76082: 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC 4.2.1.17 from Escherichia coli
YdbR / b1393: putative 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli
P76082: enoyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli

34% id,
98% cov

More...

ABB28_RS03505 ABB28_03530 WP_057507300.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

FADJ_ECOLI / P77399: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 1.1.1.35 from Escherichia coli
FadJ / b2341: 3-hydroxyacyl-CoA dehydrogenase FadJ (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli
fadJ / RF|NP_416843: fatty acid oxidation complex subunit alpha; EC 1.1.1.35; EC 4.2.1.17; EC 5.1.2.3 from Escherichia coli
fadJ / P77399: multifunctional 3-hydroxyacyl-CoA dehydrogenase/3-hydroxyacyl-CoA epimerase/enoyl-CoA hydratase FadJ (EC 1.1.1.35; EC 4.2.1.17; EC 4.2.1.74; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli

36% id,
96% cov

HP15_1512: Enoyl-CoA hydratase (EC 4.2.1.17) from Marinobacter adhaerens

35% id,
94% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

35% id,
92% cov

More...

ABB28_RS12065 ABB28_12100 WP_057508866.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

ECH17_MYCBO / Q7TXE1: Probable enoyl-CoA hydratase EchA17; EC 4.2.1.17 from Mycobacterium bovis
ECH17_MYCTU / P9WNN3: Probable enoyl-CoA hydratase EchA17; EC 4.2.1.17 from Mycobacterium tuberculosis

33% id,
85% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

27% id,
95% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

26% id,
95% cov

More...

ABB28_RS04905 ABB28_04940 WP_057507561.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q9SE41: enoyl-CoA hydratase (EC 4.2.1.17) from Avicennia marina

30% id,
92% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

26% id,
89% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

27% id,
72% cov

More...

ABB28_RS16875 ABB28_16920 WP_057687527.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

PAAF_ECOLI / P76082: 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC 4.2.1.17 from Escherichia coli
YdbR / b1393: putative 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli
P76082: enoyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli

29% id,
88% cov

FER4_USTMA / Q4PEN0: Enoyl-CoA isomerase/hydratase fer4; Fe-regulated protein 4; Ferrichrome A biosynthesis protein fer4; EC 4.2.1.17 from Ustilago maydis

27% id,
93% cov

Tfu_0067 / Q47TV9: enoyl-CoA hydratase (EC 4.2.1.17) from Thermobifida fusca

26% id,
90% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory