Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query
| dapA ABB28_RS11735 ABB28_11770 WP_057508811.1: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
PS417_04195: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas simiae | 31% id, 75% cov |
Pf1N1B4_1110: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas fluorescens | 31% id, 74% cov |
BPHYT_RS24155: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Burkholderia phytofirmans | 29% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1165-2274 (frame -2) on NZ_LDJK01000052.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_52, whole genome shotgun sequence is similar to: | PaperBLAST |
PS417_04195: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas simiae | 31% id, 78% cov |
Pf1N1B4_1110: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas fluorescens | 30% id, 77% cov |
PP_3599: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Pseudomonas putida | 32% id, 62% cov |
Lawrence Berkeley National Laboratory