Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 7 curated entries in PaperBLAST's database that match '4.2.1.42' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

dgoD ABB28_RS13175 ABB28_13215 WP_057509055.1: galactonate dehydratase
is similar to:
PaperBLAST

TAGAD_SALTY / Q8ZL58: L-talarate/galactarate dehydratase; TalrD/GalrD; StTGD; EC 4.2.1.156; EC 4.2.1.42 from Salmonella typhimurium
Q8ZL58: L-talarate dehydratase (EC 4.2.1.156); galactarate dehydratase (EC 4.2.1.42) from Salmonella enterica

27% id,
75% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory