Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query
| dapA ABB28_RS11735 ABB28_11770 WP_057508811.1: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp. | 30% id, 87% cov |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 27% id, 95% cov |
HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae | 27% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1165-2274 (frame -2) on NZ_LDJK01000052.1 Stenotrophomonas chelatiphaga strain DSM 21508 contig_52, whole genome shotgun sequence is similar to: | PaperBLAST |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 27% id, 98% cov |
Lawrence Berkeley National Laboratory