Curated BLAST for Genomes

 

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 9 curated entries in PaperBLAST's database that match '5.3.3.4' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS17645 WP_083491884.1: muconolactone Delta-isomerase family protein
is similar to:
PaperBLAST

mmlJ / Q471R4: methylmuconolactone isomerase monomer (EC 5.3.3.4) from Cupriavidus pinatubonensis

38% id,
97% cov

C5MR75: muconolactone DELTA-isomerase (EC 5.3.3.4) from Pseudomonas reinekei

36% id,
98% cov

PS417_23665: Muconolactone isomerase (EC 5.3.3.4) from Pseudomonas simiae

37% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory