Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Stenotrophomonas chelatiphaga DSM 21508 (GCF_001431535.1)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Stenotrophomonas chelatiphaga DSM 21508, or try another query

ABB28_RS09425 ABB28_09455 WP_057508383.1: cystathionine gamma-synthase is similar to:	PaperBLAST
6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase	92% id, 100% cov
Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae	89% id, 96% cov
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	65% id, 98% cov
metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori	56% id, 99% cov
A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis	55% id, 99% cov
8j6nA / P18757: Crystal structure of cystathionine gamma-lyase in complex with compound 1	55% id, 97% cov
CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum	55% id, 98% cov
7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579	54% id, 99% cov
MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis	54% id, 98% cov
CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus	55% id, 95% cov
CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus	55% id, 95% cov
CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens	55% id, 93% cov
B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	53% id, 95% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	53% id, 95% cov
6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine	51% id, 98% cov
1n8pA / P31373: Crystal structure of cystathionine gamma-lyase from yeast	48% id, 97% cov
mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans	51% id, 92% cov
CYS3_YEAST / P31373: Cystathionine gamma-lyase; gamma-CTLase; Gamma-cystathionase; Sulfur transfer protein 1; EC 4.4.1.1 from Saccharomyces cerevisiae P31373: cystathionine gamma-lyase (EC 4.4.1.1) from Saccharomyces cerevisiae	48% id, 97% cov
Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus	49% id, 95% cov
Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa	49% id, 93% cov
7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii	42% id, 95% cov
E9AFE7: cystathionine gamma-lyase (EC 4.4.1.1) from Leishmania major	41% id, 93% cov
B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii	42% id, 91% cov
More...

ABB28_RS11200 ABB28_11240 WP_057508709.1: O-succinylhomoserine (thiol)-lyase is similar to:	PaperBLAST
6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase	46% id, 98% cov
Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae	47% id, 98% cov
A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis	45% id, 99% cov
metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori	45% id, 98% cov
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	45% id, 99% cov
CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum	44% id, 97% cov
MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis	42% id, 99% cov
1n8pA / P31373: Crystal structure of cystathionine gamma-lyase from yeast	42% id, 98% cov
CYS3_YEAST / P31373: Cystathionine gamma-lyase; gamma-CTLase; Gamma-cystathionase; Sulfur transfer protein 1; EC 4.4.1.1 from Saccharomyces cerevisiae P31373: cystathionine gamma-lyase (EC 4.4.1.1) from Saccharomyces cerevisiae	42% id, 97% cov
6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine	41% id, 99% cov
7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579	41% id, 97% cov
B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	43% id, 93% cov
Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus	41% id, 96% cov
8j6nA / P18757: Crystal structure of cystathionine gamma-lyase in complex with compound 1	41% id, 97% cov
CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus	42% id, 95% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	42% id, 95% cov
Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa	43% id, 91% cov
mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans	42% id, 92% cov
CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus	41% id, 95% cov
CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens	41% id, 94% cov
E9AFE7: cystathionine gamma-lyase (EC 4.4.1.1) from Leishmania major	36% id, 93% cov
7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii	34% id, 95% cov
B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii	34% id, 91% cov
More...

cysK ABB28_RS15950 ABB28_15995 WP_057687361.1: cysteine synthase A is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	43% id, 98% cov

ABB28_RS09420 ABB28_09450 WP_057508382.1: pyridoxal-phosphate dependent enzyme is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	39% id, 93% cov

ABB28_RS07595 ABB28_07630 WP_057508056.1: cysteine desulfurase is similar to:	PaperBLAST
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	30% id, 44% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	23% id, 34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory