Curated BLAST for Genomes

 

Curated BLAST

Searching in Kocuria flava HO-9041 (GCF_001482365.1)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Kocuria flava HO-9041, or try another query

AS188_RS03425 AS188_03425 WP_058857662.1: gluconokinase
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

34% id,
97% cov

mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

29% id,
100% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

29% id,
100% cov

More...

AS188_RS00790 AS188_00790 WP_058857239.1: gluconokinase
is similar to:
PaperBLAST

SMc03164: Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti

27% id,
99% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

26% id,
99% cov

PGA1_c14010: Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens

26% id,
99% cov

More...

glpK AS188_RS11235 AS188_11235 WP_058858930.1: glycerol kinase GlpK
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

28% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory