Curated BLAST for Genomes

 

Curated BLAST

Searching in Kocuria flava HO-9041 (GCF_001482365.1)

Found 20 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Kocuria flava HO-9041, or try another query

AS188_RS12500 AS188_12500 WP_058859129.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

39% id,
92% cov

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

43% id,
81% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

37% id,
86% cov

More...

AS188_RS11385 AS188_11385 WP_058858956.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

41% id,
77% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

28% id,
84% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

28% id,
86% cov

More...

AS188_RS00920 AS188_00920 WP_058857263.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

37% id,
73% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

32% id,
85% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

29% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory