Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 42 curated entries in PaperBLAST's database that match '1.1.1.95' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

serA AU252_RS19125 AU252_19125 WP_058932076.1: phosphoglycerate dehydrogenase
is similar to:		 PaperBLAST

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

 66% id,
99% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

 50% id,
100% cov

serA / GB|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis

 36% id,
99% cov

More...

AU252_RS18585 AU252_18585 WP_058931990.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 41% id,
98% cov

AU252_RS04885 AU252_04885 WP_058929756.1: phosphoglycerate dehydrogenase
is similar to:		 PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

 35% id,
88% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

 34% id,
86% cov

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

 36% id,
68% cov

More...

AU252_RS19525 AU252_19525 WP_240484233.1: D-2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

 34% id,
84% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

 26% id,
77% cov

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

 29% id,
58% cov

More...

AU252_RS07215 AU252_07215 WP_058932805.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:		 PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

 33% id,
88% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

 29% id,
92% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

 33% id,
67% cov

More...

AU252_RS16225 AU252_16225 WP_058931617.1: C-terminal binding protein
is similar to:		 PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

 25% id,
98% cov

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

 29% id,
73% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

 36% id,
58% cov

More...

adhP AU252_RS16205 AU252_16205 WP_205630586.1: alcohol dehydrogenase AdhP
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 27% id,
90% cov

AU252_RS12885 AU252_12885 WP_058931068.1: S-(hydroxymethyl)mycothiol dehydrogenase
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 25% id,
92% cov

AU252_RS20710 AU252_20710 WP_058932325.1: S-(hydroxymethyl)mycothiol dehydrogenase
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 25% id,
91% cov

AU252_RS09620 AU252_09620 WP_058930519.1: NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

 30% id,
70% cov

SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus
Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus
O08651: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Rattus norvegicus

 31% id,
59% cov

SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus
Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus

 31% id,
59% cov

More...

AU252_RS05505 AU252_05505 WP_058929860.1: 2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

 26% id,
68% cov

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

 29% id,
55% cov

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

 29% id,
53% cov

More...

AU252_RS15980 AU252_15980 WP_058931580.1: L-idonate 5-dehydrogenase
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 30% id,
49% cov

AU252_RS06485 AU252_06485 WP_058930023.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:		 PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

 28% id,
11% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

 28% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory