Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 5 curated entries in PaperBLAST's database that match '1.5.1.50' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

fabG AU252_RS00780 AU252_00780 WP_058929092.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum

31% id,
89% cov

AU252_RS21835 AU252_21835 WP_058932500.1: SDR family oxidoreductase
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum

40% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3139779-3140660 (frame -3) on NZ_CP013747.1 Pseudarthrobacter sulfonivorans strain Ar51 chromosome, complete genome
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum
Also see hits to annotated proteins above

32% id,
76% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory