Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 37 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

glpK AU252_RS21090 AU252_21090 WP_058932386.1: glycerol kinase GlpK
is similar to:
PaperBLAST

D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.

74% id,
100% cov

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis

62% id,
97% cov

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

56% id,
99% cov

More...

AU252_RS22395 AU252_22395 WP_058932584.1: FGGY family carbohydrate kinase
is similar to:
PaperBLAST

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis

26% id,
90% cov

GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus

22% id,
69% cov

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

26% id,
53% cov

More...

araB AU252_RS22370 AU252_22370 WP_058932580.1: ribulokinase
is similar to:
PaperBLAST

GLPK_TRYBB / Q9NJP9: Glycerol kinase, glycosomal; GK; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Trypanosoma brucei
Q9NJP9: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei
D3KVM4: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei
D3KVM3: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei

23% id,
98% cov

B0I530: glycerol kinase (EC 2.7.1.30) from Trypanosoma vivax

25% id,
64% cov

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

27% id,
47% cov

More...

AU252_RS14790 AU252_14790 WP_058931374.1: rhamnulokinase family protein
is similar to:
PaperBLAST

GLPK5_MOUSE / Q8BX05: Glycerol kinase 5; GK 5; Glycerokinase 5; ATP:glycerol 3-phosphotransferase 5; EC 2.7.1.30 from Mus musculus

25% id,
51% cov

Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens

23% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4924515-4926176 (frame +3) on NZ_CP013747.1 Pseudarthrobacter sulfonivorans strain Ar51 chromosome, complete genome
is similar to:
PaperBLAST

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis
Also see hits to annotated proteins above

26% id,
93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory