Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 19 curated entries in PaperBLAST's database that match '3.1.2.4' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

AU252_RS07800 AU252_07800 WP_058930224.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 58% id,
100% cov

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

 32% id,
63% cov

C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii

 27% id,
73% cov

More...

AU252_RS07810 AU252_07810 WP_058930226.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii

 45% id,
97% cov

PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

 40% id,
99% cov

Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

 40% id,
97% cov

More...

AU252_RS00745 AU252_00745 WP_083510176.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 38% id,
99% cov

AO353_25665: 3-hydroxy-isobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

 33% id,
53% cov

RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis

 28% id,
61% cov

More...

AU252_RS00885 AU252_00885 WP_058929110.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 35% id,
97% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

 24% id,
67% cov

Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens

 27% id,
58% cov

More...

AU252_RS15010 AU252_15010 WP_240484195.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 32% id,
98% cov

RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis

 32% id,
53% cov

AU252_RS00315 AU252_00315 WP_240484271.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 31% id,
97% cov

AU252_RS00825 AU252_00825 WP_083510178.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 30% id,
98% cov

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

 34% id,
40% cov

AU252_RS04935 AU252_04935 WP_205630637.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

 29% id,
93% cov

AU252_RS01275 AU252_01275 WP_058929179.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

 27% id,
76% cov

PS417_13835: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas simiae

 31% id,
57% cov

bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus
Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus

 31% id,
57% cov

More...

AU252_RS15445 AU252_15445 WP_058931485.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana
Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Arabidopsis thaliana

 26% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory