Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

deoC AU252_RS03965 AU252_03965 WP_058929608.1: deoxyribose-phosphate aldolase
is similar to:
PaperBLAST

C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp.

61% id,
100% cov

D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis

59% id,
100% cov

Q9AIP7: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus mutans

57% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory