Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 33 curated entries in PaperBLAST's database that match '4.2.1.51' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

pheA AU252_RS09030 AU252_09030 WP_058930422.1: prephenate dehydratase
is similar to:		 PaperBLAST

PHEA_MYCBO / Q7TVJ6: Prephenate dehydratase; PDT; EC 4.2.1.51 from Mycobacterium bovis
PHEA_MYCTU / P9WIC3: Prephenate dehydratase; PDT; EC 4.2.1.51 from Mycobacterium tuberculosis
P9WIC3: prephenate dehydratase (EC 4.2.1.51) from Mycobacterium tuberculosis

 42% id,
95% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC 4.2.1.51 from Methanocaldococcus jannaschii

 33% id,
97% cov

Q8DUV6: prephenate dehydratase (EC 4.2.1.51) from Streptococcus mutans

 31% id,
97% cov

More...

AU252_RS11905 AU252_11905 WP_058930896.1: prephenate dehydratase
is similar to:		 PaperBLAST

Q5NLV8: prephenate dehydratase (EC 4.2.1.51) from Zymomonas mobilis

 47% id,
83% cov

Q8DUV6: prephenate dehydratase (EC 4.2.1.51) from Streptococcus mutans

 33% id,
98% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC 4.2.1.51 from Methanocaldococcus jannaschii

 31% id,
100% cov

More...

AU252_RS13400 AU252_13400 WP_058931154.1: transporter substrate-binding domain-containing protein
is similar to:		 PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

 23% id,
93% cov

AU252_RS15960 AU252_15960 WP_058931576.1: ABC transporter substrate-binding protein
is similar to:		 PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

 30% id,
58% cov

AU252_RS17970 AU252_17970 WP_058931888.1: ABC transporter substrate-binding protein
is similar to:		 PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

 22% id,
68% cov

AU252_RS11425 AU252_11425 WP_058930811.1: transporter substrate-binding domain-containing protein
is similar to:		 PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

 32% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory