Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudarthrobacter sulfonivorans Ar51 (GCF_001484605.1)

Found 22 curated entries in PaperBLAST's database that match 'argininosuccinate lyase' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudarthrobacter sulfonivorans Ar51, or try another query

argH AU252_RS02870 AU252_02870 WP_058929437.1: argininosuccinate lyase
is similar to:
PaperBLAST

argH / CAA88927.2: argininosuccinate lyase from Streptomyces clavuligerus

68% id,
99% cov

P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis

67% id,
98% cov

6ienB / P9WPY7: Substrate/product bound argininosuccinate lyase from mycobacterium tuberculosis

67% id,
98% cov

More...

AU252_RS13350 AU252_13350 WP_205630574.1: lyase family protein
is similar to:
PaperBLAST

argH / BAC65282.1: argininosuccinate lyase from Burkholderia multivorans

28% id,
96% cov

6ienB / P9WPY7: Substrate/product bound argininosuccinate lyase from mycobacterium tuberculosis

28% id,
96% cov

2e9fB / Q5SLL0: Crystal structure of t.Th.Hb8 argininosuccinate lyase complexed with l-arginine

32% id,
82% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory