Curated BLAST for Genomes

 

Curated BLAST

Searching in Hyphomicrobium sulfonivorans WDL6 (GCF_001541235.1)

Found 77 curated entries in PaperBLAST's database that match '2.3.1.31' as complete word(s).

These curated entries have 68 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Hyphomicrobium sulfonivorans WDL6, or try another query

APY04_RS16095 APY04_3368 WP_068464883.1: homoserine O-acetyltransferase
is similar to:
PaperBLAST

METXA_CAUVC / Q9AAS1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Caulobacter vibrioides

68% id,
96% cov

METXA_SOLM1 / C4XNQ9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Solidesulfovibrio magneticus

57% id,
91% cov

METXA_CHLAA / A9WKM8: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Chloroflexus aurantiacus

49% id,
98% cov

More...

metW APY04_RS16100 APY04_3369 WP_068464885.1: methionine biosynthesis protein MetW
is similar to:
PaperBLAST

MTXAW_RHOBA / Q7UG04: Bifunctional methionine biosynthesis protein MetXA/MetW; EC 2.3.1.31 from Rhodopirellula baltica

35% id,
30% cov

APY04_RS06070 APY04_1255 WP_068460790.1: alpha/beta hydrolase
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

32% id,
27% cov

guaB APY04_RS01835 APY04_0384 WP_068459176.1: IMP dehydrogenase
is similar to:
PaperBLAST

METXA_METRM / D3E3E4: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobrevibacter ruminantium

26% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

65-1570 (frame -1) on NZ_LMTR01000019.1 Hyphomicrobium sulfonivorans strain WDL6 contig_125, whole genome shotgun sequence
is similar to:
PaperBLAST

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum
Also see hits to annotated proteins above

25% id,
26% cov

31149-32789 (frame +3) on NZ_LMTR01000084.1 Hyphomicrobium sulfonivorans strain WDL6 contig_154, whole genome shotgun sequence
is similar to:
PaperBLAST

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum
Also see hits to annotated proteins above

29% id,
19% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory