Curated BLAST for Genomes

 

Curated BLAST

Searching in Hyphomicrobium sulfonivorans WDL6 (GCF_001541235.1)

Found 5 curated entries in PaperBLAST's database that match 'anthranilate synthase alpha subunit' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Hyphomicrobium sulfonivorans WDL6, or try another query

trpE APY04_RS08350 APY04_1737 WP_068461603.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

39% id,
99% cov

ASA1_ORYSJ / Q94GF1: Anthranilate synthase alpha subunit 1, chloroplastic; OsASA1; EC 4.1.3.27 from Oryza sativa

41% id,
87% cov

ASA2_ORYSJ / Q9XJ29: Anthranilate synthase alpha subunit 2, chloroplastic; OsASA2; EC 4.1.3.27 from Oryza sativa

42% id,
83% cov

More...

pabB APY04_RS11160 APY04_2327 WP_068462644.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

33% id,
71% cov

ASA1_ORYSJ / Q94GF1: Anthranilate synthase alpha subunit 1, chloroplastic; OsASA1; EC 4.1.3.27 from Oryza sativa

32% id,
52% cov

ASA2_ORYSJ / Q9XJ29: Anthranilate synthase alpha subunit 2, chloroplastic; OsASA2; EC 4.1.3.27 from Oryza sativa

32% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory