Curated BLAST for Genomes

 

Curated BLAST

Searching in Steroidobacter denitrificans DSM 18526 (GCF_001579945.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.1.13' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Steroidobacter denitrificans DSM 18526, or try another query

ACG33_RS03230 ACG33_03225 WP_066918647.1: prephenate dehydrogenase/arogenate dehydrogenase family protein
is similar to:
PaperBLAST

A0A101IGG2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Methanothrix harundinacea

25% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory