Curated BLAST for Genomes

 

Curated BLAST

Searching in Steroidobacter denitrificans DSM 18526 (GCF_001579945.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Steroidobacter denitrificans DSM 18526, or try another query

ACG33_RS14145 ACG33_14150 WP_210399097.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 33% id,
94% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 31% id,
94% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 31% id,
93% cov

More...

ACG33_RS02865 ACG33_02860 WP_066918533.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

 30% id,
100% cov

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

 30% id,
95% cov

ORNAT_PYRHO / O50131: Ornithine aminotransferase; Orn-AT; Ornithine delta-aminotransferase; EC 2.6.1.13 from Pyrococcus horikoshii

 32% id,
86% cov

More...

bioA ACG33_RS06630 ACG33_06635 WP_066919755.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:		 PaperBLAST

OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans
otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans

 33% id,
87% cov

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 30% id,
94% cov

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

 30% id,
92% cov

More...

hemL ACG33_RS03090 ACG33_03085 WP_066918605.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:		 PaperBLAST

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

 30% id,
79% cov

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

 29% id,
75% cov

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

 31% id,
68% cov

More...

ACG33_RS10060 ACG33_10060 WP_066920875.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:		 PaperBLAST

B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum

 25% id,
77% cov

S8EY38: ornithine aminotransferase (EC 2.6.1.13) from Toxoplasma gondii

 30% id,
24% cov

OAT_ORYSJ / Q10G56: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Oryza sativa

 25% id,
22% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory