Curated BLAST for Genomes

 

Curated BLAST

Searching in Kocuria turfanensis HO-9042 (GCF_001580365.1)

Found 119 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 94 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Kocuria turfanensis HO-9042, or try another query

fbaA AYX06_RS08285 WP_062735369.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

P9WQA3: fructose-bisphosphate aldolase (EC 4.1.2.13) from Mycobacterium tuberculosis

67% id,
99% cov

ALF_CANAL / Q9URB4: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; 37 kDa major allergen; Fructose-1,6-bisphosphate aldolase; IgE-binding allergen; EC 4.1.2.13 from Candida albicans
FBA1: fructose-bisphosphate aldolase; EC 4.1.2.13 from Candida albicans
Q9URB4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Candida albicans

42% id,
94% cov

ALF1_PARBA / Q96UH7: Fructose-bisphosphate aldolase 1; FBP aldolase 1; FBPA 1; Fructose-1,6-bisphosphate aldolase 1; EC 4.1.2.13 from Paracoccidioides lutzii
Q96UH7: fructose-bisphosphate aldolase (EC 4.1.2.13) from Paracoccidioides lutzii

40% id,
96% cov

More...

AYX06_RS10015 WP_062735644.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

Q8Y498: fructose-bisphosphate aldolase (EC 4.1.2.13) from Listeria monocytogenes

36% id,
97% cov

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

35% id,
89% cov

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

32% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory