Curated BLAST for Genomes

 

Curated BLAST

Searching in Endozoicomonas montiporae CL-33 (GCF_001583435.1)

Found 31 curated entries in PaperBLAST's database that match '1.1.1.28' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Endozoicomonas montiporae CL-33, or try another query

EZMO1_RS02600 EZMO1_0511 WP_034879327.1: D-2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

33% id,
89% cov

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

31% id,
90% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

36% id,
78% cov

More...

serA EZMO1_RS01150 EZMO1_0229 WP_034879179.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

31% id,
92% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

33% id,
84% cov

GB|CAA47255.1: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus helveticus
P30901: D-lactate dehydrogenase (EC 1.1.1.28) from Lactobacillus helveticus

28% id,
92% cov

More...

pdxB EZMO1_RS16670 EZMO1_3291 WP_244886704.1: 4-phosphoerythronate dehydrogenase PdxB
is similar to:
PaperBLAST

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

28% id,
93% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

31% id,
71% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

31% id,
67% cov

More...

EZMO1_RS24635 EZMO1_4863 WP_034877681.1: glyoxylate/hydroxypyruvate reductase A
is similar to:
PaperBLAST

O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum

26% id,
93% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

25% id,
90% cov

CH_091801: D-lactate dehydrogenase; EC 1.1.1.28 from Leuconostoc mesenteroides
D-ldh / P51011: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Leuconostoc mesenteroides

22% id,
98% cov

More...

EZMO1_RS22375 EZMO1_4406 WP_034878505.1: FAD-binding and (Fe-S)-binding domain-containing protein
is similar to:
PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

25% id,
60% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

31% id,
32% cov

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

33% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory