Curated BLAST for Genomes

 

Curated BLAST

Searching in Collimonas arenae Ter10 (GCF_001584165.1)

Found 30 curated entries in PaperBLAST's database that match '1.13.11.11' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Collimonas arenae Ter10, or try another query

kynA CAter10_RS04900 CAter10_1129 WP_061532529.1: tryptophan 2,3-dioxygenase
is similar to:
PaperBLAST

RR42_RS15390: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Cupriavidus basilensis

68% id,
98% cov

PfGW456L13_4292: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens

65% id,
99% cov

AO353_05970: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens

64% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory