Searching in Collimonas arenae Ter10 (GCF_001584165.1)
Found 8 curated entries in PaperBLAST's database that match '1.3.8.6' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Collimonas arenae Ter10, or try another query
CAter10_RS02405 CAter10_0542 WP_061532141.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 31% id, 94% cov |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 29% id, 94% cov |
B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp. | 28% id, 95% cov |
CAter10_RS15295 CAter10_3581 WP_061534082.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 31% id, 94% cov |
B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp. | 31% id, 94% cov |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 28% id, 95% cov |
CAter10_RS15480 CAter10_3624 WP_061534111.1: acyl-CoA dehydrogenase is similar to: | PaperBLAST |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 28% id, 84% cov |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 26% id, 84% cov |
GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus | 25% id, 75% cov |
CAter10_RS15605 CAter10_3653 WP_061534131.1: acyl-CoA dehydrogenase is similar to: | PaperBLAST |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 26% id, 84% cov |
GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus | 26% id, 53% cov |
GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa | 29% id, 47% cov |
CAter10_RS02355 CAter10_0527 WP_061532135.1: acyl-CoA dehydrogenase C-terminal domain-containing protein is similar to: | PaperBLAST |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 26% id, 69% cov |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 29% id, 58% cov |
B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp. | 26% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1790229-1791377 (frame -3) on NZ_CP013233.1 Collimonas arenae strain Ter10 chromosome, complete genome is similar to: | PaperBLAST |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 85% id, 92% cov |
B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp. | 81% id, 92% cov |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 79% id, 93% cov |
1791158-1791529 (frame -1) on NZ_CP013233.1 Collimonas arenae strain Ter10 chromosome, complete genome is similar to: | PaperBLAST |
Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei | 77% id, 8% cov |
gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida | 73% id, 8% cov |
B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp. | 54% id, 9% cov |
Lawrence Berkeley National Laboratory