Curated BLAST for Genomes

 

Curated BLAST

Searching in Collimonas arenae Ter10 (GCF_001584165.1)

Found 6 curated entries in PaperBLAST's database that match '1.4.1.18' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Collimonas arenae Ter10, or try another query

CAter10_RS05655 CAter10_1297 WP_061532649.1: saccharopine dehydrogenase C-terminal domain-containing protein
is similar to:
PaperBLAST

Q5LX24: lysine 6-dehydrogenase (EC 1.4.1.18) from Ruegeria pomeroyi

50% id,
99% cov

Q3S559: lysine 6-dehydrogenase (EC 1.4.1.18) from Achromobacter denitrificans

49% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory