Curated BLAST for Genomes

 

Curated BLAST

Searching in Collimonas arenae Ter10 (GCF_001584165.1)

Found 14 curated entries in PaperBLAST's database that match '3.2.1.48' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Collimonas arenae Ter10, or try another query

CAter10_RS03340 CAter10_0765 WP_236905483.1: glycoside hydrolase family 31 protein
is similar to:
PaperBLAST

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
17% cov

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
17% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

27% id,
17% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

700906-703164 (frame -2) on NZ_CP013233.1 Collimonas arenae strain Ter10 chromosome, complete genome
is similar to:
PaperBLAST

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)
Also see hits to annotated proteins above

25% id,
21% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens
Also see hits to annotated proteins above

24% id,
21% cov

AAA31459.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.20|3.2.1.48)
Also see hits to annotated proteins above

28% id,
16% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory