Curated BLAST for Genomes

 

Curated BLAST

Searching in Collimonas arenae Ter10 (GCF_001584165.1)

Found 32 curated entries in PaperBLAST's database that match '3.5.1.9' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Collimonas arenae Ter10, or try another query

kynB CAter10_RS04910 CAter10_1132 WP_061532530.1: arylformamidase
is similar to:
PaperBLAST

KYNB_CUPMC / P0C8P4: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Cupriavidus metallidurans
kynB: kynurenine formamidase; EC 3.5.1.9 from Ralstonia metallidurans

71% id,
95% cov

KYNB_BURCJ / B4E9I9: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Burkholderia cenocepacia
B4E9I9: arylformamidase (EC 3.5.1.9) from Burkholderia cenocepacia

67% id,
96% cov

Q63WP3: arylformamidase (EC 3.5.1.9) from Burkholderia pseudomallei

67% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1052044-1052754 (frame -2) on NZ_CP013233.1 Collimonas arenae strain Ter10 chromosome, complete genome
is similar to:
PaperBLAST

KYNB_CUPMC / P0C8P4: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Cupriavidus metallidurans
kynB: kynurenine formamidase; EC 3.5.1.9 from Ralstonia metallidurans
Also see hits to annotated proteins above

69% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory