Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Collimonas arenae Ter10 (GCF_001584165.1)

Found 23 curated entries in PaperBLAST's database that match '4.3.1.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Collimonas arenae Ter10, or try another query

hutH CAter10_RS09455 CAter10_2182 WP_061533210.1: histidine ammonia-lyase is similar to:	PaperBLAST
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans	63% id, 98% cov
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida	62% id, 98% cov
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis	62% id, 97% cov
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	62% id, 96% cov
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	60% id, 99% cov
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp.	60% id, 97% cov
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis	58% id, 98% cov
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti	55% id, 98% cov
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens	51% id, 100% cov
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis	43% id, 97% cov
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp.	43% id, 94% cov
AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	42% id, 95% cov
Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	40% id, 96% cov
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum	43% id, 89% cov
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus	44% id, 78% cov
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens	43% id, 78% cov
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	44% id, 75% cov
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis	44% id, 74% cov
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	45% id, 72% cov
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans	41% id, 74% cov
More...

CAter10_RS16265 CAter10_3809 WP_061534232.1: aromatic amino acid ammonia-lyase is similar to:	PaperBLAST
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans	37% id, 98% cov
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	36% id, 97% cov
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp.	36% id, 99% cov
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida	36% id, 97% cov
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis	37% id, 94% cov
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	36% id, 97% cov
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis	36% id, 98% cov
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens	37% id, 94% cov
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis	34% id, 98% cov
AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	33% id, 100% cov
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum	34% id, 97% cov
Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	34% id, 96% cov
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti	36% id, 89% cov
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp.	33% id, 95% cov
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	37% id, 74% cov
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis	35% id, 77% cov
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens	35% id, 78% cov
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	34% id, 77% cov
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus	34% id, 78% cov
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans	34% id, 75% cov
More...

CAter10_RS06395 CAter10_1462 WP_061532761.1: aromatic amino acid ammonia-lyase is similar to:	PaperBLAST
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans	37% id, 98% cov
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida	37% id, 97% cov
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	36% id, 99% cov
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	36% id, 99% cov
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis	37% id, 94% cov
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp.	35% id, 99% cov
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis	36% id, 98% cov
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens	37% id, 94% cov
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum	34% id, 99% cov
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis	34% id, 98% cov
AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	33% id, 99% cov
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti	36% id, 89% cov
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp.	33% id, 95% cov
Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	35% id, 85% cov
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	37% id, 74% cov
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis	35% id, 77% cov
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens	35% id, 78% cov
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	35% id, 77% cov
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus	34% id, 78% cov
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans	34% id, 76% cov
More...

CAter10_RS11855 CAter10_2766 WP_082798057.1: aromatic amino acid ammonia-lyase is similar to:	PaperBLAST
SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti	34% id, 95% cov
AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	34% id, 93% cov
Ac3H11_2558: Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp.	33% id, 95% cov
BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans	33% id, 96% cov
Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis	32% id, 97% cov
Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	33% id, 93% cov
BWI76_RS08740: Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis	31% id, 98% cov
HUTH_DICDI / Q54JI7: Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum	31% id, 96% cov
Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	32% id, 95% cov
PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens	31% id, 95% cov
Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis	33% id, 91% cov
PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens	31% id, 95% cov
HUTH_PSEPU / P21310: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida hutH / P21310: histidase subunit (EC 4.3.1.3) from Pseudomonas putida	31% id, 95% cov
CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp.	29% id, 98% cov
HUTH_HUMAN / P42357: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens HAL / P42357: histidase subunit (EC 4.3.1.3) from Homo sapiens P42357: histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens	35% id, 76% cov
HUTH_RAT / P21213: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus	34% id, 77% cov
Q0VGW8: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis	34% id, 76% cov
HUTH1_CAEEL / Q20502: Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans	34% id, 74% cov
F6RBJ7: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	34% id, 75% cov
Q6AZU6: histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis	33% id, 76% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory