Curated BLAST for Genomes

 

Curated BLAST

Searching in Collimonas pratensis Ter91 (GCF_001584185.1)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.175' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Collimonas pratensis Ter91, or try another query

CPter91_RS17185 CPter91_3721 WP_061942316.1: SDR family oxidoreductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

51% id,
98% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

51% id,
96% cov

CPter91_RS13460 CPter91_2921 WP_061946210.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

35% id,
96% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

32% id,
94% cov

CPter91_RS07315 CPter91_1561 WP_061938896.1: SDR family oxidoreductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

35% id,
96% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

34% id,
94% cov

CPter91_RS19730 CPter91_4279 WP_061943145.1: 3-oxoacyl-ACP reductase family protein
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

34% id,
97% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

31% id,
96% cov

CPter91_RS24970 CPter91_5433 WP_061945499.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

35% id,
94% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

33% id,
96% cov

CPter91_RS07330 CPter91_1564 WP_061938902.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

34% id,
94% cov

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

30% id,
96% cov

CPter91_RS13440 CPter91_2916 WP_061941122.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

33% id,
96% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

31% id,
94% cov

fabG CPter91_RS07815 CPter91_1667 WP_082792675.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

32% id,
96% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

32% id,
94% cov

CPter91_RS12840 CPter91_2781 WP_061940845.1: SDR family oxidoreductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

32% id,
95% cov

CPter91_RS16440 CPter91_3560 WP_061942072.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

30% id,
97% cov

CPter91_RS10730 CPter91_2318 WP_061940047.1: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

31% id,
95% cov

CPter91_RS21895 CPter91_4774 WP_061944160.1: SDR family oxidoreductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

29% id,
98% cov

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

29% id,
95% cov

fabG CPter91_RS11390 CPter91_2467 WP_061940268.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

29% id,
95% cov

CPter91_RS19160 CPter91_4156 WP_061942949.1: SDR family oxidoreductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

31% id,
88% cov

CPter91_RS00040 CPter91_0009 WP_061935306.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis

29% id,
93% cov

CPter91_RS06820 CPter91_1451 WP_061938685.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
XDH_CAUVN / B8H1Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides
CCNA_00864: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter crescentus
B8H1Z0: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Caulobacter vibrioides

29% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory