Curated BLAST for Genomes

 

Curated BLAST

Searching in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512 (GCF_001592305.1)

Found 42 curated entries in PaperBLAST's database that match '1.1.1.95' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512, or try another query

serA HTA01S_RS22370 WP_068175438.1: phosphoglycerate dehydrogenase
is similar to:		 PaperBLAST

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

 73% id,
100% cov

A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri

 73% id,
87% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

 62% id,
100% cov

More...

HTA01S_RS24250 WP_068176599.1: FAD/FMN-binding oxidoreductase
is similar to:		 PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

 75% id,
49% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

 71% id,
49% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

 73% id,
47% cov

More...

HTA01S_RS02540 WP_068166972.1: glyoxylate/hydroxypyruvate reductase A
is similar to:		 PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

 31% id,
93% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

 28% id,
77% cov

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

 26% id,
50% cov

More...

HTA01S_RS18420 WP_068174208.1: D-glycerate dehydrogenase
is similar to:		 PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

 30% id,
92% cov

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

 31% id,
70% cov

U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii

 28% id,
73% cov

More...

HTA01S_RS08640 WP_068169361.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:		 PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

 31% id,
83% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

 30% id,
74% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

 28% id,
75% cov

More...

HTA01S_RS23695 WP_068176259.1: NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

 28% id,
92% cov

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

 27% id,
77% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

 34% id,
57% cov

More...

HTA01S_RS11165 WP_068170984.1: glyoxylate/hydroxypyruvate reductase A
is similar to:		 PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

 29% id,
87% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

 25% id,
79% cov

serA / GB|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis

 27% id,
57% cov

More...

HTA01S_RS13040 WP_068172089.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 28% id,
91% cov

HTA01S_RS14575 WP_068173503.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 28% id,
70% cov

HTA01S_RS01870 WP_068166854.1: L-idonate 5-dehydrogenase
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 32% id,
53% cov

HTA01S_RS08910 WP_068169500.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:		 PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

 30% id,
55% cov

HTA01S_RS20820 WP_068174821.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:		 PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

 31% id,
15% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

 34% id,
11% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

 29% id,
6% cov

More...

HTA01S_RS02835 WP_068167022.1: FAD-binding oxidoreductase
is similar to:		 PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

 34% id,
13% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

 30% id,
13% cov

HTA01S_RS10365 WP_068170440.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:		 PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

 38% id,
6% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

 36% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory