Curated BLAST for Genomes

 

Curated BLAST

Searching in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512 (GCF_001592305.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512, or try another query

HTA01S_RS23370 WP_174545217.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

79% id,
100% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

44% id,
98% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

44% id,
95% cov

More...

HTA01S_RS09175 WP_068169777.1: branched-chain amino acid transaminase
is similar to:
PaperBLAST

BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans

70% id,
100% cov

Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri

63% id,
99% cov

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

61% id,
99% cov

More...

HTA01S_RS06765 WP_068168339.1: amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

50% id,
100% cov

HTA01S_RS00330 WP_174545172.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

41% id,
96% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

39% id,
99% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

39% id,
96% cov

More...

HTA01S_RS10535 WP_068170828.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

33% id,
89% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

31% id,
89% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

30% id,
86% cov

More...

HTA01S_RS20380 WP_068174679.1: D-amino acid aminotransferase
is similar to:
PaperBLAST

E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica

30% id,
94% cov

A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis

30% id,
93% cov

ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus
A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus

30% id,
90% cov

More...

HTA01S_RS18585 WP_068174238.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

29% id,
90% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

30% id,
84% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

28% id,
82% cov

More...

HTA01S_RS02815 WP_068167021.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

26% id,
100% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

27% id,
89% cov

HTA01S_RS23350 WP_068176016.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

28% id,
86% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

27% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory