Searching in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512 (GCF_001592305.1)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512, or try another query
| HTA01S_RS13455 WP_068172344.1: altronate dehydratase family protein is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 34% id, 93% cov |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 37% id, 84% cov |
| garD HTA01S_RS16155 WP_068173723.1: galactarate dehydratase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 33% id, 89% cov |
| manD HTA01S_RS13450 WP_068172340.1: D-mannonate dehydratase ManD is similar to: | PaperBLAST |
RHMD_SPHSS / Q1NEI8: L-rhamnonate dehydratase; RhamD; SpLRA3; EC 4.2.1.90 from Sphingomonas sp. | 26% id, 84% cov |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 25% id, 85% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 24% id, 76% cov |
| HTA01S_RS01850 WP_068166850.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
RHMD_SALTY / Q8ZNF9: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Salmonella typhimurium | 25% id, 84% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 24% id, 85% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 24% id, 70% cov |
| dgoD HTA01S_RS16420 WP_068173823.1: galactonate dehydratase is similar to: | PaperBLAST |
RHMD_SPHSS / Q1NEI8: L-rhamnonate dehydratase; RhamD; SpLRA3; EC 4.2.1.90 from Sphingomonas sp. | 31% id, 65% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 30% id, 64% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 26% id, 76% cov |
| HTA01S_RS05350 WP_068167544.1: L-fuconate dehydratase is similar to: | PaperBLAST |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 28% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 71737-74064 (frame -1) on NZ_BCWR01000010.1 Hydrogenophaga taeniospiralis CCUG 15921 strain NBRC 102512, whole genome shotgun sequence is similar to: | PaperBLAST |
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 36% id, 89% cov |
| 16155-17573 (frame +3) on NZ_BCWR01000013.1 Hydrogenophaga taeniospiralis CCUG 15921 strain NBRC 102512, whole genome shotgun sequence is similar to: | PaperBLAST |
RHMD_SPHSS / Q1NEI8: L-rhamnonate dehydratase; RhamD; SpLRA3; EC 4.2.1.90 from Sphingomonas sp. | 29% id, 73% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 26% id, 82% cov |
Lawrence Berkeley National Laboratory