Curated BLAST for Genomes

 

Curated BLAST

Searching in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512 (GCF_001592305.1)

Found 15 curated entries in PaperBLAST's database that match '5.3.1.14' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512, or try another query

rhaI HTA01S_RS10220 WP_084236003.1: L-rhamnose catabolism isomerase
is similar to:
PaperBLAST

SMc02321: L-rhamnose isomerase (EC 5.3.1.14) from Sinorhizobium meliloti

72% id,
99% cov

Q75WH8: L-rhamnose isomerase (EC 5.3.1.14) from Pseudomonas stutzeri

70% id,
99% cov

HSERO_RS22240: L-rhamnose isomerase (EC 5.3.1.14) from Herbaspirillum seropedicae

65% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory