Curated BLAST for Genomes

 

Curated BLAST

Searching in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512 (GCF_001592305.1)

Found 14 curated entries in PaperBLAST's database that match '6.3.1.11' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Hydrogenophaga taeniospiralis CCUG 15921 NBRC 102512, or try another query

HTA01S_RS08250 WP_068169126.1: glutamine synthetase family protein
is similar to:		 PaperBLAST

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

 60% id,
100% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

 54% id,
99% cov

BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis

 34% id,
94% cov

More...

HTA01S_RS10525 WP_068170530.1: glutamine synthetase family protein
is similar to:		 PaperBLAST

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

 60% id,
100% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

 53% id,
100% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

 38% id,
98% cov

More...

HTA01S_RS04300 WP_218017304.1: glutamine synthetase family protein
is similar to:		 PaperBLAST

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

 46% id,
98% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

 43% id,
99% cov

BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis

 36% id,
92% cov

More...

HTA01S_RS10475 WP_068170490.1: type III glutamate--ammonia ligase
is similar to:		 PaperBLAST

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

 30% id,
97% cov

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

 33% id,
85% cov

BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis

 29% id,
90% cov

More...

HTA01S_RS19030 WP_068174313.1: glutamine synthetase family protein
is similar to:		 PaperBLAST

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

 31% id,
92% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

 28% id,
98% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

 28% id,
96% cov

More...

HTA01S_RS06575 WP_068168235.1: glutamine synthetase family protein
is similar to:		 PaperBLAST

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

 29% id,
93% cov

glnA HTA01S_RS02885 WP_068167029.1: type I glutamate--ammonia ligase
is similar to:		 PaperBLAST

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

 28% id,
96% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

 27% id,
95% cov

PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae

 27% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory