Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermovenabulum gondwanense R270 (GCF_001601575.1)

Found 4 curated entries in PaperBLAST's database that match '2.6.1.84' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Thermovenabulum gondwanense R270, or try another query

ATZ99_RS06170 ATZ99_12390 WP_068748371.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

PP_3721: arginine:pyruvate transaminase AruH (EC 2.6.1.84) from Pseudomonas putida

34% id,
92% cov

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

33% id,
90% cov

ATZ99_RS09760 ATZ99_19420 WP_068749043.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

32% id,
94% cov

PP_3721: arginine:pyruvate transaminase AruH (EC 2.6.1.84) from Pseudomonas putida

32% id,
94% cov

ATZ99_RS04920 ATZ99_09870 WP_068748124.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

PP_3721: arginine:pyruvate transaminase AruH (EC 2.6.1.84) from Pseudomonas putida

29% id,
93% cov

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

29% id,
90% cov

ATZ99_RS09790 ATZ99_19490 WP_068749049.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

PP_3721: arginine:pyruvate transaminase AruH (EC 2.6.1.84) from Pseudomonas putida

23% id,
88% cov

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

22% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory