Searching in Thermovenabulum gondwanense R270 (GCF_001601575.1)
Found 9 curated entries in PaperBLAST's database that match '4.3.1.12' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Thermovenabulum gondwanense R270, or try another query
| ATZ99_RS03005 ATZ99_05950 WP_068747764.1: ornithine cyclodeaminase family protein is similar to: | PaperBLAST |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 31% id, 77% cov |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 29% id, 79% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 32% id, 72% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 88022-89038 (frame -2) on NZ_LOHZ01000022.1 Thermovenabulum gondwanense strain R270 ATZ99_contig000023, whole genome shotgun sequence is similar to: | PaperBLAST |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 31% id, 85% cov |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 29% id, 92% cov |
Lawrence Berkeley National Laboratory