Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudovibrio axinellae Ad2 (GCF_001623255.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudovibrio axinellae Ad2, or try another query

PsAD2_RS05040 PsAD2_01025 WP_068003245.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

53% id,
99% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

54% id,
96% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

27% id,
97% cov

PsAD2_RS21780 PsAD2_04363 WP_068010615.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

38% id,
97% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

38% id,
94% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

32% id,
96% cov

More...

glk PsAD2_RS00270 PsAD2_00054 WP_068000403.1: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

35% id,
96% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

35% id,
96% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

31% id,
96% cov

More...

PsAD2_RS05310 PsAD2_01079 WP_068003429.1: ROK family protein
is similar to:
PaperBLAST

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

26% id,
93% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

27% id,
89% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

24% id,
96% cov

More...

PsAD2_RS12865 PsAD2_02610 WP_068006520.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

25% id,
67% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

24% id,
67% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

29% id,
52% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory